Matlab Index
Matlab Directories
RAVEN
Matlab Files found in these Directories
SBMLFromExcel
dispEM
getINITModel
parseHPA
addExchangeRxns
downloadKEGG
getIndexes
parseRxnEqu
addGenes
drawMap
getKEGGModelForOrganism
parseScores
addMets
drawPathway
getMILPParams
parseTaskList
addRxns
expandModel
getMetsFromKEGG
permuteModel
addTransport
exportModel
getMetsInComp
plotAdditionalInfo
analyzeSampling
exportModelToSIF
getMinNrFluxes
plotLabels
canConsume
exportToExcelFormat
getModelFromHomology
predictLocalization
canProduce
exportToTabDelimited
getModelFromKEGG
printFluxes
changeRxns
fillGaps
getObjectiveString
printModel
checkInstallation
findGeneDeletions
getPathwayDimensions
printModelStats
checkModelStruct
fitParameters
getPhylDist
qMOMA
checkProduction
fitTasks
getRxnsFromKEGG
randomSampling
checkRxn
followChanged
getRxnsInComp
removeBadRxns
checkSolution
followFluxes
getTransportRxns
removeGenes
checkTasks
gapReport
getWoLFScores
removeMets
cleanBadChars
getAllSubGraphs
guessComposition
removeRxns
cleanBadCharsInModel
getAllowedBounds
haveFlux
reporterMets
colorPathway
getBlast
importExcelModel
runINIT
compareModels
getBlastFromExcel
importModel
scoreModel
constructEquations
getColorCodes
makeSomething
setParam
constructMultiFasta
getElementalBalance
mapCompartments
setTitle
constructPathwayFromCelldesigner
getEssentialRxns
mapPathwayRxnNames
simplifyModel
constructS
getExchangeRxns
markPathwayWithExpression
solveLP
consumeSomething
getExpressionStructure
markPathwayWithFluxes
solveQP
contractModel
getFluxZ
mergeCompartments
sortModel
convertToIrrev
getFullPath
mergeModels
trimPathway
copyToComps
getGenesFromKEGG
parseFormulas
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