Matlab Index

Matlab Directories

Matlab Files found in these Directories

SBMLFromExcel dispEM getINITModel parseHPA
addExchangeRxns downloadKEGG getIndexes parseRxnEqu
addGenes drawMap getKEGGModelForOrganism parseScores
addMets drawPathway getMILPParams parseTaskList
addRxns expandModel getMetsFromKEGG permuteModel
addTransport exportModel getMetsInComp plotAdditionalInfo
analyzeSampling exportModelToSIF getMinNrFluxes plotLabels
canConsume exportToExcelFormat getModelFromHomology predictLocalization
canProduce exportToTabDelimited getModelFromKEGG printFluxes
changeRxns fillGaps getObjectiveString printModel
checkInstallation findGeneDeletions getPathwayDimensions printModelStats
checkModelStruct fitParameters getPhylDist qMOMA
checkProduction fitTasks getRxnsFromKEGG randomSampling
checkRxn followChanged getRxnsInComp removeBadRxns
checkSolution followFluxes getTransportRxns removeGenes
checkTasks gapReport getWoLFScores removeMets
cleanBadChars getAllSubGraphs guessComposition removeRxns
cleanBadCharsInModel getAllowedBounds haveFlux reporterMets
colorPathway getBlast importExcelModel runINIT
compareModels getBlastFromExcel importModel scoreModel
constructEquations getColorCodes makeSomething setParam
constructMultiFasta getElementalBalance mapCompartments setTitle
constructPathwayFromCelldesigner getEssentialRxns mapPathwayRxnNames simplifyModel
constructS getExchangeRxns markPathwayWithExpression solveLP
consumeSomething getExpressionStructure markPathwayWithFluxes solveQP
contractModel getFluxZ mergeCompartments sortModel
convertToIrrev getFullPath mergeModels trimPathway
copyToComps getGenesFromKEGG parseFormulas

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